Institutional Repository of Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences
Discovery of immune related factors in Fenneropenaeus chinensis by annotation of ESTs | |
Shen, YQ; Xiang, JH; Wang, B; Li, FH; Tong, W | |
2004 | |
发表期刊 | PROGRESS IN NATURAL SCIENCE |
ISSN | 1002-0071 |
卷号 | 14期号:1页码:47-54 |
文章类型 | Article |
摘要 | A total of 10446 expressed sequence tags (ESTs) are obtained by a large-scale sequencing of a cDNA library from cephalothorax of adult Fenneropenaeus chinensis. An EST analysis platform was built up based on local computers and bioinformatic techniques were used to annotate these ESTs in order to promptly find possible functional genes, especially for immune related factors. About 4% of the ESTs show similarity to the coding sequences of such factors, including lectin, serine protease, serpin, lysozyme, etc. These ESTs provide a partial profile of the immune system in F. chinensis and useful information for further study on these genes.; A total of 10446 expressed sequence tags (ESTs) are obtained by a large-scale sequencing of a cDNA library from cephalothorax of adult Fenneropenaeus chinensis. An EST analysis platform was built up based on local computers and bioinformatic techniques were used to annotate these ESTs in order to promptly find possible functional genes, especially for immune related factors. About 4% of the ESTs show similarity to the coding sequences of such factors, including lectin, serine protease, serpin, lysozyme, etc. These ESTs provide a partial profile of the immune system in F. chinensis and useful information for further study on these genes. |
关键词 | Fenneropenaeus Chinensis Bioinformatics Ests Immune Factors |
学科领域 | Multidisciplinary Sciences |
收录类别 | SCI |
语种 | 英语 |
WOS记录号 | WOS:000188789300009 |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.qdio.ac.cn/handle/337002/3218 |
专题 | 实验海洋生物学重点实验室 |
作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Expt Marine Biol Lab, Qingdao 266071, Peoples R China 2.Chinese Acad Sci, Grad Sch, Beijing 100039, Peoples R China 3.Chinese Acad Sci, Geonom & Bioinformat Inst, Beijing 101300, Peoples R China |
推荐引用方式 GB/T 7714 | Shen, YQ,Xiang, JH,Wang, B,et al. Discovery of immune related factors in Fenneropenaeus chinensis by annotation of ESTs[J]. PROGRESS IN NATURAL SCIENCE,2004,14(1):47-54. |
APA | Shen, YQ,Xiang, JH,Wang, B,Li, FH,&Tong, W.(2004).Discovery of immune related factors in Fenneropenaeus chinensis by annotation of ESTs.PROGRESS IN NATURAL SCIENCE,14(1),47-54. |
MLA | Shen, YQ,et al."Discovery of immune related factors in Fenneropenaeus chinensis by annotation of ESTs".PROGRESS IN NATURAL SCIENCE 14.1(2004):47-54. |
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