Institutional Repository of Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences
| The genetic diversity and differentiation of shrimp Fenneropenaeus chinensis in the Yellow Sea revealed by polymorphism in control region of mitochondrial DNA | |
Wang, L.1 ; Yang, J.1; Sun, M.1,2; Yang, C.1; Cui, Z.1; Jang, In K.3; Song, L.1
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| 2014 | |
| 发表期刊 | ISJ-INVERTEBRATE SURVIVAL JOURNAL
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| 卷号 | 11页码:309-318 |
| 文章类型 | Article |
| 摘要 | Chinese white shrimp Fenneropenaeus chinensis is a commercially important species in northern China and Korea. In the present study, the genetic diversity of five populations collected from Qingdao (QD), Rizhao (RZ) of China, and Narodo Island (KN), Taean (KT), Yeongguang (KY) of Korea in the Yellow Sea was investigated using the mitochondrial control region (CR). The length of the amplified partial mitochondrial control region (mtCR) ranged from 600 to 622 bp, and the sequence variations were distributed among 13 polymorphic sites. The pattern of nucleotide substitution was biased in favour of transitions over transversions in variable sites, including 12 transitions (si, 4 A <-> G and 8 T <-> C changes) and only one was transversion (sv, 1 T <-> G changes). Altogether, 24 unique haplotypes were identified from five populations in Yellow Sea. The overall haplotype diversity and nucleotide diversity were 0.368 - 0.421 and 0.052 - 0.079, respectively, and the lowest genetic diversity was found in QD population. There was no differentiation between the two Chinese populations (F-ST = 0.039). Within the Korean populations, there was a slight differentiation (F-ST = 0.075, p < 0.05) between KN and KT. The relative bigger differentiation was shown between RZ and KN population (F-ST = 0.170, p < 0.05). The relative further genetic distance was shown between RZ and KN population as well as between QD and KN population, while the relative closer genetic distance was shown between KT and KY, and between KT and RZ population. The low variability in the mitochondrial control region among F. chinensis in the Yellow Sea indicated the low genetic diversity in comparison to other shrimp species. The results suggested a slight population differentiation among F. chinensis populations. Such information will assist in sustainable use, management, and conservation of the species. |
| 关键词 | Fenneropenaeus Chinensis Control Region Genetic Diversity Population Genetics Polymorphism |
| 收录类别 | SCI |
| 语种 | 英语 |
| WOS记录号 | WOS:000350915300030 |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.qdio.ac.cn/handle/337002/25341 |
| 专题 | 实验海洋生物学重点实验室 |
| 作者单位 | 1.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China 2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 3.Natl Fisheries Res & Dev Inst, West Sea Mariculture Res Ctr, Taean 357945, Chungnam, South Korea |
| 第一作者单位 | 实验海洋生物学重点实验室 |
| 推荐引用方式 GB/T 7714 | Wang, L.,Yang, J.,Sun, M.,et al. The genetic diversity and differentiation of shrimp Fenneropenaeus chinensis in the Yellow Sea revealed by polymorphism in control region of mitochondrial DNA[J]. ISJ-INVERTEBRATE SURVIVAL JOURNAL,2014,11:309-318. |
| APA | Wang, L..,Yang, J..,Sun, M..,Yang, C..,Cui, Z..,...&Song, L..(2014).The genetic diversity and differentiation of shrimp Fenneropenaeus chinensis in the Yellow Sea revealed by polymorphism in control region of mitochondrial DNA.ISJ-INVERTEBRATE SURVIVAL JOURNAL,11,309-318. |
| MLA | Wang, L.,et al."The genetic diversity and differentiation of shrimp Fenneropenaeus chinensis in the Yellow Sea revealed by polymorphism in control region of mitochondrial DNA".ISJ-INVERTEBRATE SURVIVAL JOURNAL 11(2014):309-318. |
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| 文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
| The genetic diversit（338KB） | 期刊论文 | 出版稿 | 限制开放 | ODC PDDL | 浏览 | |
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