Transcriptome analysis of purple and green <i>Apostichopus japonicus</i> reared under different breeding environments

doi:10.3389/fmars.2024.1334761

	*Transcriptome analysis of purple and green Apostichopus japonicus* reared under different breeding environments**
	Liu, Bohong 1,2,3; Xing, Lili1,2,3 ; Liu, Shilin 1,2,3; Sun, Lina 1,2,3; Su, Fang1,2,3 ; Cui, Wei1,2,3 ; Jiang, Chunxi 1,2,3
	2024-02-12
发表期刊	FRONTIERS IN MARINE SCIENCE
卷号	11 页码:11
通讯作者	Xing, Lili([email protected]) ; Sun, Lina([email protected])
摘要	Sea cucumber (Apostichopus japonicus) is one of the cultured species with the highest production value to a single species in China's marine agricultural industry with high nutritional and medicinal value. Body color influences numerous biological functions in sea cucumbers, and it has become a key trait in selective breeding. It is found that a cultivation environment with strong light intensity leads to a lighter body color of A. japonicus compared to dark conditions. However, little research has been conducted on the molecular mechanisms regulating body color in different breeding environments. In this study, we used Illumina sequencing to examine gene expression patterns in green and purple A. japonicus exposed to different culture conditions. Overall, the genes in the body wall of purple individuals were more affected by the environment. We also identified pathways that were potentially influenced by the breeding environment, such as "Drug metabolism - cytochrome P450", "Porphyrin and chlorophyll metabolism", "Phosphatidylinositol signaling system", "TGF-beta signaling", and "mTOR signaling". The aim of this study was to determine the light conditions and breeding environment that are more favorable to the requirements of body color in A. japonicus and apply them to the selection of high-quality breeds. The results obtained will support the breeding of A. japonicus with specific traits and the production of seedlings to promote the development of this maricultural industry.
关键词	Apostichopus japonicus transcriptome body color breeding environment differentially expressed genes
DOI	10.3389/fmars.2024.1334761
收录类别	SCI
语种	英语
资助项目	Institute of Oceanology, Chinese Academy of Sciences10.13039/501100010554
WOS研究方向	Environmental Sciences & Ecology ; Marine & Freshwater Biology
WOS类目	Environmental Sciences ; Marine & Freshwater Biology
WOS记录号	WOS:001175121700001
出版者	FRONTIERS MEDIA SA
WOS关键词	MIGRATION INHIBITORY FACTOR ; TGF-BETA ; UDP-GLUCURONOSYLTRANSFERASE ; LIGHT COLOR ; EXPRESSION ; PATHWAY ; SHRIMP ; GROWTH ; GENE
引用统计	被引频次：1[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/184900
专题	海洋生态与环境科学重点实验室
通讯作者	Xing, Lili; Sun, Lina
作者单位	1.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Chinese Acad Sci, Inst Oceanol, Engn Lab Marine Ranching, Qingdao, Peoples R China 3.Univ Chinese Acad Sci, Beijing, Peoples R China
第一作者单位	中国科学院海洋研究所
通讯作者单位	中国科学院海洋研究所
推荐引用方式 GB/T 7714	Liu, Bohong,Xing, Lili,Liu, Shilin,et al. Transcriptome analysis of purple and green Apostichopus japonicus reared under different breeding environments[J]. FRONTIERS IN MARINE SCIENCE,2024,11:11.
APA	Liu, Bohong.,Xing, Lili.,Liu, Shilin.,Sun, Lina.,Su, Fang.,...&Jiang, Chunxi.(2024).Transcriptome analysis of purple and green Apostichopus japonicus reared under different breeding environments.FRONTIERS IN MARINE SCIENCE,11,11.
MLA	Liu, Bohong,et al."Transcriptome analysis of purple and green Apostichopus japonicus reared under different breeding environments".FRONTIERS IN MARINE SCIENCE 11(2024):11.