Transcriptome analysis of <i>Litopenaeus vannamei</i> during the early stage of limb regeneration process

doi:10.46989/001c.88325

IOCAS-IR

	*Transcriptome analysis of Litopenaeus vannamei* during the early stage of limb regeneration process**
	Yue, Wucheng 1,2; Yuan, Ruiming 3; Jang, Donghuo 3,4; Guo, Xiangzhao 1,3; Li, Fuhua 2; Qian, Xueqiao 1
	2023
发表期刊	ISRAELI JOURNAL OF AQUACULTURE-BAMIDGEH
ISSN	0792-156X
卷号	75 期号:2 页码:10
通讯作者	Qian, Xueqiao([email protected])
摘要	Regeneration is a process in which organisms regrow new tissues or organs at the injury site, which has attracted the attention of many scientists and nonscientists. However, the underlying molecular mechanisms of regeneration after autotomy are largely unknown. In this study, we conducted RNA-seq sequencing on regenerated limb bud tissues of Litopenaeus vannamei at 0 hours post autotomy (0 hpa), 12 hours post autotomy (12 hpa), and 24 hours post autotomy (24 hpa). A total of 2,192 differentially expressed genes related to energy metabolism, transcription and translation, and epidermis development were identified between 0 hpa and 12 hpa, such as triosephosphate isomerase A, triosephosphate isomerase B, and zinc finger protein 367 that is upregulated in 12 hpa. Between 12 hpa and 24 hpa, 1,447 differentially expressed genes were identified that were related to cuticle development and energy metabolism, such as cuticle protein 6, which is upregulated in 24 hpa, and triosephosphate isomerase is downregulated in 24 hpa. The results indicated that energy metabolism, transcription and translation, epidermal formation, and chitin metabolism processes are involved during the early stage of limb regeneration. This study provides basic knowledge for investigating the molecular mechanisms associated with limb regeneration in crustaceans at the early regeneration stage.
关键词	autotomy regeneration transcriptome
DOI	10.46989/001c.88325
收录类别	SCI
语种	英语
资助项目	Guangdong International Science & Technology Cooperation Program[2020A0505100026]
WOS研究方向	Fisheries
WOS类目	Fisheries
WOS记录号	WOS:001177437700002
出版者	AquacultureHub Inc
WOS关键词	AUTOTOMY ; CRAB ; GROWTH ; CELLS
引用统计	被引频次：1[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/184847
专题	中国科学院海洋研究所
通讯作者	Qian, Xueqiao
作者单位	1.Guangdong Haid Grp Co Ltd, Anim Husb & Fisheries Res Ctr, Guangzhou, Peoples R China 2.Chinese Acad Sci, Inst Oceanol, Beijing, Peoples R China 3.Guangdong Haid Grp Co Ltd, Guangzhou, Peoples R China 4.Hainan Haida Aquat Seed Ind Dev Co Ltd, Nantong, Peoples R China
第一作者单位	中国科学院海洋研究所
推荐引用方式 GB/T 7714	Yue, Wucheng,Yuan, Ruiming,Jang, Donghuo,et al. Transcriptome analysis of Litopenaeus vannamei during the early stage of limb regeneration process[J]. ISRAELI JOURNAL OF AQUACULTURE-BAMIDGEH,2023,75(2):10.
APA	Yue, Wucheng,Yuan, Ruiming,Jang, Donghuo,Guo, Xiangzhao,Li, Fuhua,&Qian, Xueqiao.(2023).Transcriptome analysis of Litopenaeus vannamei during the early stage of limb regeneration process.ISRAELI JOURNAL OF AQUACULTURE-BAMIDGEH,75(2),10.
MLA	Yue, Wucheng,et al."Transcriptome analysis of Litopenaeus vannamei during the early stage of limb regeneration process".ISRAELI JOURNAL OF AQUACULTURE-BAMIDGEH 75.2(2023):10.