Genome-wide SNP markers provided insights into the reproductive strategy and genetic diversity of the green tide causative species <i>Ulva prolifera</i> in China

doi:10.1007/s00343-023-3060-2

	*Genome-wide SNP markers provided insights into the reproductive strategy and genetic diversity of the green tide causative species Ulva prolifera* in China**
	Sun, Song1,2,3,4 ; Ma, Weiwei 1,4; Wang, Nan1,2 ; Feng, Song1,2 ; Sun, Yan 1,2
	2024-01-11
发表期刊	JOURNAL OF OCEANOLOGY AND LIMNOLOGY
ISSN	2096-5508
页码	11
通讯作者	Sun, Yan([email protected])
摘要	Ulva prolifera is the causative species of the annually occurring large-scale green tides in China since 2007. Its specific biological features on reproductivity strategies, as well as intra-species genetic diversity, are still largely unknown, especially at the genome level, despite their importance in understanding the formation and outbreak of massive green tides. In the present study, the restriction site-associated DNA genotyping approach (2b-RAD) was adopted to identify the genome-wide single-nucleotide polymorphisms (SNPs) of 54 individual thalli including samples collected from Subei Shoal in 2019 and Qingdao coast from 2019 to 2021. SNPs genotype results revealed that most of the thalli in 2019 and 2020 were haploid gametophytes, while only half of the thalli were gametophytes in 2021, indicating flexibility in the reproductive strategies for the formation of the green tides among different years and the dominance of asexual and vegetative reproductive mode for the floating period. Besides, population analysis was conducted and revealed a very low genetic diversity among samples from Subei Shoal and the Qingdao coast in the same year and a higher divergence among samples in different years. The results showed the efficiency of 2b-RAD in the exploration of SNPs in U. prolifera and provided the first genome-wide scale evidence for the origin of the large-scale green tides on the Qingdao coast. This study improved our understanding of the reproductive strategy and genetic diversity of the green tide causative species and will help in further revealing the biological causes of the green tide in China.
关键词	green tide Ulva prolifera 2b-RAD single-nucleotide polymorphism (SNP) reproductive strategy genetic diversity
DOI	10.1007/s00343-023-3060-2
收录类别	SCI
语种	英语
资助项目	Laoshan Laboratory[LSKJ202204005]; Mount Tai Scholar Climbing Plan; Open Fund of CAS Key Laboratory of Marine Ecology and Environmental Sciences, Institute of Oceanology, Chinese Academy of Sciences[KLMEES201801]
WOS研究方向	Marine & Freshwater Biology ; Oceanography
WOS类目	Limnology ; Oceanography
WOS记录号	WOS:001141710300020
出版者	SCIENCE PRESS
WOS关键词	YELLOW SEA ; MACROALGAL BLOOMS ; ALGAL BLOOMS ; EXPANSION ; CHLOROPHYTA ; ORIGIN ; GROWTH ; AREA
引用统计
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/184303
专题	海洋生态与环境科学重点实验室胶州湾海洋生态系统国家野外研究站
通讯作者	Sun, Yan
作者单位	1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao 266071, Peoples R China 2.Laoshan Lab, Marine Ecol & Environm Sci Lab, Qingdao 266237, Peoples R China 3.Chinese Acad Sci, Jiaozhou Bay Marine Ecosyst Res Stn, Qingdao 266071, Peoples R China 4.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
第一作者单位	海洋生态与环境科学重点实验室
通讯作者单位	海洋生态与环境科学重点实验室
推荐引用方式 GB/T 7714	Sun, Song,Ma, Weiwei,Wang, Nan,et al. Genome-wide SNP markers provided insights into the reproductive strategy and genetic diversity of the green tide causative species Ulva prolifera in China[J]. JOURNAL OF OCEANOLOGY AND LIMNOLOGY,2024:11.
APA	Sun, Song,Ma, Weiwei,Wang, Nan,Feng, Song,&Sun, Yan.(2024).Genome-wide SNP markers provided insights into the reproductive strategy and genetic diversity of the green tide causative species Ulva prolifera in China.JOURNAL OF OCEANOLOGY AND LIMNOLOGY,11.
MLA	Sun, Song,et al."Genome-wide SNP markers provided insights into the reproductive strategy and genetic diversity of the green tide causative species Ulva prolifera in China".JOURNAL OF OCEANOLOGY AND LIMNOLOGY (2024):11.