Transcriptome analysis provides insights into the mechanism of carapace stripe formation in two closely related Marsupenaeus species

doi:10.3389/fmars.2023.1234940

IOCAS-IR > 实验海洋生物学重点实验室

	Transcriptome analysis provides insights into the mechanism of carapace stripe formation in two closely related Marsupenaeus species
	Wang, Panpan 1,2,3,4,5,6; Xie, Shumin 1,2; Li, Xinyang 1,2; Zhu, Jiawei 1,2; You, Ziqi 1,2; Zhou, Xinlei 1,2; Zhou, Xinyi 1,2; Yan, Binlun 1,2,3,4,5; Gao, Huan 1,2,3,4,5; Xing, Chaofan 1,2,3,4,5
	2023-08-04
发表期刊	FRONTIERS IN MARINE SCIENCE
卷号	10 页码:12
通讯作者	Xing, Chaofan([email protected])
摘要	Marsupenaeus japonicus has two types of phenotypic differences that are mainly reflected in the stripe pattern of the carapace. However, the underlying mechanism regulating the stripe patterns is not clear. In the present study, we first observed the composition of pigment cells and detected the contents of different carotenoids in the carapace of M. japonicus. We clearly observed the setae structure on the carapace. There were red pigment cells in the stripe pattern and yellow pigment cells in the other parts. Both red pigment cells and yellow pigment cells showed dendritic morphology. In the carapace, the content of astaxanthin was the highest, significantly (P < 0.05) higher than that of other carotenoids. Some differentially expressed genes between two pattern types of M. japonicus, may be associated with the body color formation, such as crustacyanin (CRCN), apolipoprotein D (ApoD), tubulin alpha-1 chain, cuticle protein, and ABC transporter, which were verified by quantitative PCR experiments. The amino acid composition and secondary structure of CRCN A2, CRCN C1, and ApoD were significantly different. The results of this study will help to elucidate the molecular mechanism of the differential pattern formation of M. japonicus and provide a reference for further exploration of the formation mechanism of crustacean color.
关键词	Marsupenaeus japonicus carapace stripe transcriptome crustacyanin formation mechanism
DOI	10.3389/fmars.2023.1234940
收录类别	SCI
语种	英语
资助项目	Natural Science Foundation of Jiangsu Province[BK20210924]; Open-end Funds of Jiangsu Key Laboratory of Marine Bioresources and Environment[SH20221205]; China Postdoctoral Science Foundation[2022M721397]; Postdoctoral Science Foundation of Lianyungang[LYG20220021]; Postgraduate Research amp; Practice Innovation Program of Jiangsu Province[KYCX23-3454]; Postgraduate Research amp; Practice Innovation Program of Jiangsu Province[KYCX2023-104]; Innovation and Entrepreneurship Project of Jiangsu Ocean University[SY202311641631003]; Innovation and Entrepreneurship Project of Jiangsu Ocean University[SY202311641631010]; 521scientific research projects of Lianyungang[LYG06521202128]; Fisheries high quality development project of Yancheng[YCSCYJ2021006]; Priority Academic Program Development of Jiangsu Higher Education Institutions (PAPD)
WOS研究方向	Environmental Sciences & Ecology ; Marine & Freshwater Biology
WOS类目	Environmental Sciences ; Marine & Freshwater Biology
WOS记录号	WOS:001050189800001
出版者	FRONTIERS MEDIA SA
WOS关键词	COLOR ; ASTAXANTHIN ; SHRIMP ; PIGMENTATION ; GENES ; TROUT
引用统计	被引频次：2[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/182754
专题	实验海洋生物学重点实验室
通讯作者	Xing, Chaofan
作者单位	1.Jiangsu Ocean Univ, Jiangsu Key Lab Marine Bioresources & Environm, Lianyungang, Peoples R China 2.Jiangsu Ocean Univ, Jiangsu Key Lab Marine Biotechnol, Lianyungang, Peoples R China 3.Jiangsu Ocean Univ, Co Innovat Ctr Jiangsu Marine Bioind Technol, Lianyungang, Peoples R China 4.Jiangsu Ocean Univ, Jiangsu Inst Marine Resources Dev, Lianyungang, Peoples R China 5.Jiangsu Prov Infrastruct Conservat & Utilizat Agr, Nanjing, Peoples R China 6.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao, Peoples R China
第一作者单位	中国科学院海洋研究所
推荐引用方式 GB/T 7714	Wang, Panpan,Xie, Shumin,Li, Xinyang,et al. Transcriptome analysis provides insights into the mechanism of carapace stripe formation in two closely related Marsupenaeus species[J]. FRONTIERS IN MARINE SCIENCE,2023,10:12.
APA	Wang, Panpan.,Xie, Shumin.,Li, Xinyang.,Zhu, Jiawei.,You, Ziqi.,...&Xing, Chaofan.(2023).Transcriptome analysis provides insights into the mechanism of carapace stripe formation in two closely related Marsupenaeus species.FRONTIERS IN MARINE SCIENCE,10,12.
MLA	Wang, Panpan,et al."Transcriptome analysis provides insights into the mechanism of carapace stripe formation in two closely related Marsupenaeus species".FRONTIERS IN MARINE SCIENCE 10(2023):12.