Eight soybean reference genome resources from varying latitudes and agronomic traits

doi:10.1038/s41597-021-00947-2

IOCAS-IR

	Eight soybean reference genome resources from varying latitudes and agronomic traits
	Chu, Jeffrey Shih-Chieh 1,2; Peng, Bo 2; Tang, Kuanqiang 1; Yi, Xingxing 2,5; Zhou, Huangkai 1; Wang, Huan2 ; Li, Guang 1; Leng, Jiantian 1; Chen, Nansheng 3,4; Feng, Xianzhong 1
	2021-07-01
发表期刊	SCIENTIFIC DATA
卷号	8 期号:1 页码:8
通讯作者	Chen, Nansheng([email protected]) ; Feng, Xianzhong([email protected])
摘要	Comparative analysis of multiple reference genomes representing diverse genetic backgrounds is critical for understanding the role of key alleles important in domestication and genetic breeding of important crops such as soybean. To enrich the genetic resources for soybean, we describe the generation, technical assessment, and preliminary genomic variation analysis of eight de novo reference-grade soybean genome assemblies from wild and cultivated accessions. These resources represent soybeans cultured at different latitudes and exhibiting different agronomical traits. Of these eight soybeans, five are from new accessions that have not been sequenced before. We demonstrate the usage of these genomes to identify small and large genomic variations affecting known genes as well as screening for genic PAV regions for identifying candidates for further functional studies.
DOI	10.1038/s41597-021-00947-2
收录类别	SCI
语种	英语
资助项目	National Key Research and Development Project from the Ministry of Science and Technology of China[2016YFD0101900]; Key Research Program of Chinese Academy of Sciences[593-ZDRW-ZS-2019-2-02]; CAS Pioneer Hundred Talents Program; Taishan Scholar Project Special Fund
WOS研究方向	Science & Technology - Other Topics
WOS类目	Multidisciplinary Sciences
WOS记录号	WOS:000671793600002
出版者	NATURE RESEARCH
引用统计	被引频次：13[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/176979
专题	中国科学院海洋研究所
通讯作者	Chen, Nansheng; Feng, Xianzhong
作者单位	1.Chinese Acad Sci, Northeast Inst Geog & Agroecol, Changchun, Peoples R China 2.Wuhan Frasergen Bioinformat Inc, East Lake High Tech Zone, Wuhan, Peoples R China 3.Chinese Acad Sci, Inst Oceanol, Qingdao, Peoples R China 4.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC, Canada 5.Huazhong Agr Univ, Coll Life Sci & Technol, Wuhan, Peoples R China
通讯作者单位	中国科学院海洋研究所
推荐引用方式 GB/T 7714	Chu, Jeffrey Shih-Chieh,Peng, Bo,Tang, Kuanqiang,et al. Eight soybean reference genome resources from varying latitudes and agronomic traits[J]. SCIENTIFIC DATA,2021,8(1):8.
APA	Chu, Jeffrey Shih-Chieh.,Peng, Bo.,Tang, Kuanqiang.,Yi, Xingxing.,Zhou, Huangkai.,...&Feng, Xianzhong.(2021).Eight soybean reference genome resources from varying latitudes and agronomic traits.SCIENTIFIC DATA,8(1),8.
MLA	Chu, Jeffrey Shih-Chieh,et al."Eight soybean reference genome resources from varying latitudes and agronomic traits".SCIENTIFIC DATA 8.1(2021):8.

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