Complete mitochondrial genome of Coscinodiscus granii (Coscinodiscophyceae, Bacillariophyta)

doi:10.1080/23802359.2021.1951135

	Complete mitochondrial genome of Coscinodiscus granii (Coscinodiscophyceae, Bacillariophyta)
	Huang, Hailong 1,2,4; Song, Huiyin 1,2,4; Zhao, Zengxia 2,5; Liu, Feng 1,2,4; Chen, Nansheng 1,2,3,4
	2021-08-03
发表期刊	MITOCHONDRIAL DNA PART B-RESOURCES
卷号	6 期号:8 页码:2332-2334
通讯作者	Chen, Nansheng([email protected])
摘要	Coscinodiscus is a genus common in marine phytoplankton, with some species thought to have a significant negative ecological impact. However, the availability of their genome sequences is rather limited. Here, we assembled and annotated the first complete mitochondrial genome (mtDNA) of the species Coscinodiscus granii L.F.Gough 1905, as part of our efforts to gain a better understanding of the genetic characteristics of Coscinodiscus taxa at a genomic level. The circular mtDNA was 34,970 bp in length and encoded 60 genes, including 32 protein-coding genes (PCGs), 24 transfer RNA (tRNA) genes, two ribosomal RNA (rRNA) genes, and two conserved open reading frames (orfs). The overall GC content of C. granii mtDNA was 24.30%, which was slightly lower than that of C. wailesii (25.00%), the first species in the genus Coscinodiscus whose mtDNA has been reported, and higher than that of Melosira undulata (21.60%), the first species in the class Coscinodiscophyceae whose mtDNA has been reported. As expected for congeneric species, phylogenetic analysis using concatenated amino acid sequences of 27 shared PCGs suggested that C. granii has a closer evolutionary relationship with C. wailesii. Coscinodiscus was found to be monophyletic in the phylogeny. The complete mtDNAs of more Coscinodiscus species will facilitate the exploration of the evolutionary relationships of species in the Class Coscinodiscophyceae.
关键词	Diatoms mitochondrial genome Coscinodiscus granii Coscinodiscophyceae
DOI	10.1080/23802359.2021.1951135
收录类别	SCI
语种	英语
资助项目	Strategic Priority Research Program of Chinese Academy of Sciences[XDB42000000]; Chinese Academy of Sciences Pioneer Hundred Talents Program; Taishan Scholar Project Special Fund; Qingdao Innovation and Creation Plan (Talent Development Program 5th Annual Pioneer and Innovator Leadership Award)[19-3-2-16-zhc]; Key Research Program of Frontier Sciences, Chinese Academy of Sciences[QYZDB-SSW-DQC023]; Major Scientific and Technological Innovation Project of Shandong Province[2019JZZY020706]; Post-doctoral Program of Qingdao 2020[E0KY061]; Natural Science Foundation of Shandong Province, China[ZR2020QD095]
WOS研究方向	Genetics & Heredity
WOS类目	Genetics & Heredity
WOS记录号	WOS:000673772200001
出版者	TAYLOR & FRANCIS LTD
引用统计	被引频次：1[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/175774
专题	海洋生态与环境科学重点实验室
通讯作者	Chen, Nansheng
作者单位	1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 3.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Peoples R China 4.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC, Canada 5.Chinese Acad Sci, Jiaozhou Bay Natl Marine Ecosyst Res Stn, Inst Oceanol, Qingdao, Peoples R China
第一作者单位	中国科学院海洋研究所
通讯作者单位	中国科学院海洋研究所
推荐引用方式 GB/T 7714	Huang, Hailong,Song, Huiyin,Zhao, Zengxia,et al. Complete mitochondrial genome of Coscinodiscus granii (Coscinodiscophyceae, Bacillariophyta)[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2021,6(8):2332-2334.
APA	Huang, Hailong,Song, Huiyin,Zhao, Zengxia,Liu, Feng,&Chen, Nansheng.(2021).Complete mitochondrial genome of Coscinodiscus granii (Coscinodiscophyceae, Bacillariophyta).MITOCHONDRIAL DNA PART B-RESOURCES,6(8),2332-2334.
MLA	Huang, Hailong,et al."Complete mitochondrial genome of Coscinodiscus granii (Coscinodiscophyceae, Bacillariophyta)".MITOCHONDRIAL DNA PART B-RESOURCES 6.8(2021):2332-2334.

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