Institutional Repository of Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences
| Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region | |
| Gao, Tian-Xiang1; Yang, Tian-Yan1; Yanagimoto, Takashi2; Xiao, Yong-Shuang3,4,5 | |
| 2019-01-02 | |
| 发表期刊 | MITOCHONDRIAL DNA PART A
 |
| ISSN | 2470-1394 |
| 卷号 | 30期号:1页码:172-183 |
| 通讯作者 | Xiao, Yong-Shuang([email protected]) |
| 摘要 | Japanese whiting (Sillago japonica) is a commercially important demersal fish distributed along the coasts of East Asia and becomes recently an aquaculture species. Despite its commercial importance, the levels and patterns of population genetic variation remain poorly understood. In this study, 346 specimens were collected from 14 localities along the coastal waters of China, Korea and Japan and their genetic variation was analyzed with mtDNA control region (D-loop) sequences. A total of 131 polymorphic sites were detected which determined 294 haplotypes. A pattern with high levels of haplotype diversity (h = 0.999 +/- 0.001) and nucleotide diversity (л = 0.030 +/- 0.015) was detected in the examined range. Analyses of analysis of molecular variance (AMOVA) and F-st showed that no significant genetic differentiation existed among China, Korea and Japan populations, excepting for the populations between Ise Bay (IBP) sample and the other ones. Minimum spanning tree (MST), neutrality tests, mismatch distribution and Bayesian skyline analyses indicated that the species along coastline of China, Korea and Japan have experienced population expansions originated in its most recent history at about 106-423 kya during the late Pleistocene glaciations and deglaciations periods. |
| 关键词 | Sillago japonica control region genetic diversity genetic structure demographic history |
| DOI | 10.1080/24701394.2018.1467411 |
| 收录类别 | SCI |
| 语种 | 英语 |
| 资助项目 | STS[ZSSD-019]###366; STS[41506170]###365; Key Laboratory of Mariculture and Enhancement of Zhejiang Province[2016KF002]###364; Marine Fishery Institute of Zhejiang Province###363; Qingdao Source Innovation Program[17-1-1-57-jch]###362; Shandong Province Keypoint Research and Invention Program[2017GHY15106]###361; Shandong Province Keypoint Research and Invention Program[2017GHY15102]###360; Scientific Startup Foundation of Zhejiang Ocean University[Q1505]###359; National Natural Science Foundation of China[41776171]###240; National Natural Science Foundation of China[31572227]###358; National Natural Science Foundation of China[31572227]; National Natural Science Foundation of China[41776171]; Scientific Startup Foundation of Zhejiang Ocean University[Q1505]; Shandong Province Keypoint Research and Invention Program[2017GHY15102]; Shandong Province Keypoint Research and Invention Program[2017GHY15106]; Qingdao Source Innovation Program[17-1-1-57-jch]; Marine Fishery Institute of Zhejiang Province; Key Laboratory of Mariculture and Enhancement of Zhejiang Province[2016KF002]; STS[41506170]; STS[ZSSD-019] |
| WOS研究方向 | Genetics & Heredity |
| WOS类目 | Genetics & Heredity |
| WOS记录号 | WOS:000461357300020 |
| 出版者 | TAYLOR & FRANCIS LTD |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.qdio.ac.cn/handle/337002/155316 |
| 专题 | 实验海洋生物学重点实验室 |
| 通讯作者 | Xiao, Yong-Shuang |
| 作者单位 | 1.Zhejiang Ocean Univ, Natl Engn Res Ctr Marine Aquaculture, Zhoushan, Zhejiang, Peoples R China 2.Fisheries Res Agcy, Natl Res Inst Fisheries Sci, Yokohama, Kanagawa, Japan 3.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao, Peoples R China 4.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China 5.Chinese Acad Sci, Ctr Ocean Megasci, Qingdao, Peoples R China |
| 通讯作者单位 | 中国科学院海洋研究所; 中国科学院海洋大科学研究中心 |
| 推荐引用方式 GB/T 7714 | Gao, Tian-Xiang,Yang, Tian-Yan,Yanagimoto, Takashi,et al. Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region[J]. MITOCHONDRIAL DNA PART A,2019,30(1):172-183. |
| APA | Gao, Tian-Xiang,Yang, Tian-Yan,Yanagimoto, Takashi,&Xiao, Yong-Shuang.(2019).Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region.MITOCHONDRIAL DNA PART A,30(1),172-183. |
| MLA | Gao, Tian-Xiang,et al."Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region".MITOCHONDRIAL DNA PART A 30.1(2019):172-183. |
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| 文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
| Levels and patterns （1326KB） | 期刊论文 | 出版稿 | 限制开放 | CC BY-NC-SA | 浏览 | |
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